Publikatsioonid ja patendid | Tartu Ülikooli bio- ja siirdemeditsiini instituut

TÜ üksuste kontaktandmed

humanitaarteaduste ja kunstide valdkond
Faculty phone: 
737 5341
Faculty address: 
Jakobi 2, ruumid 116–121, 51014 Tartu
  • valdkonna dekanaat
    Faculty phone: 
    737 5341
    Faculty address: 
    Jakobi 2, ruumid 116–121, 51005 Tartu
  • ajaloo ja arheoloogia instituut
    Faculty phone: 
    737 5651
    Faculty address: 
    Jakobi 2, 51005 Tartu
  • eesti ja üldkeeleteaduse instituut
    Faculty phone: 
    737 5221
    Faculty address: 
    Jakobi 2, IV korrus, 51005 Tartu
  • filosoofia ja semiootika instituut
    Faculty phone: 
    737 5314
    Faculty address: 
    Jakobi 2, ruumid 309–352, 51005 Tartu
  • kultuuriteaduste instituut
    Faculty phone: 
    737 5223
    Faculty address: 
    Ülikooli 16, 51003 Tartu
  • maailma keelte ja kultuuride kolledž
    Faculty address: 
    J. Liivi 4, 50409, Tartu
  • usuteaduskond
    Faculty phone: 
    737 5300
    Faculty address: 
    Ülikooli 18-310, 50090 Tartu
  • Viljandi kultuuriakadeemia
    Faculty phone: 
    435 5232
    Faculty address: 
    Posti 1, 71004 Viljandi
sotsiaalteaduste valdkond
Faculty phone: 
737 5957
Faculty address: 
Lossi 36, 51003 Tartu
  • valdkonna dekanaat
    Faculty phone: 
    737 5900
    Faculty address: 
    Lossi 36, 51003 Tartu
  • haridusteaduste instituut
    Faculty phone: 
    737 6440
    Faculty address: 
    Salme 1a–29, 50103 Tartu
  • Johan Skytte poliitikauuringute instituut
    Faculty phone: 
    737 5582
    Faculty address: 
    Lossi 36–301, 51003 Tartu
  • majandusteaduskond
    Faculty phone: 
    737 6310
    Faculty address: 
    Narva mnt 18, 51009 Tartu
  • psühholoogia instituut
    Faculty phone: 
    737 5902
    Faculty address: 
    Näituse 2, 50409 Tartu
  • õigusteaduskond
    Faculty phone: 
    737 5390
    Faculty address: 
    Näituse 20–324, 50409 Tartu
  • ühiskonnateaduste instituut
    Faculty phone: 
    737 5188
    Faculty address: 
    Lossi 36, 51003 Tartu
  • Narva kolledž
    Faculty phone: 
    740 1900
    Faculty address: 
    Raekoja plats 2, 20307 Narva
  • Pärnu kolledž
    Faculty phone: 
    445 0520
    Faculty address: 
    Ringi 35, 80012 Pärnu
meditsiiniteaduste valdkond
Faculty phone: 
737 5326
Faculty address: 
Ravila 19, 50411 Tartu
  • valdkonna dekanaat
    Faculty phone: 
    737 5326
    Faculty address: 
    Ravila 19, 50411 Tartu
  • bio- ja siirdemeditsiini instituut
    Faculty phone: 
    737 4210
    Faculty address: 
    Biomeedikum, Ravila 19, 50411 Tartu
  • farmaatsia instituut
    Faculty phone: 
    737 5286
    Faculty address: 
    Nooruse 1, 50411 Tartu
  • hambaarstiteaduse instituut
    Faculty phone: 
    731 9856
    Faculty address: 
    Raekoja plats 6, 51003 Tartu
  • kliinilise meditsiini instituut
    Faculty phone: 
    737 5323
    Faculty address: 
    L. Puusepa 8, 50406 Tartu
  • peremeditsiini ja rahvatervishoiu instituut
    Faculty phone: 
    737 4190
    Faculty address: 
    Ravila 19, 50411 Tartu
  • sporditeaduste ja füsioteraapia instituut
    Faculty phone: 
    737 5360
    Faculty address: 
    Jakobi 5–205, 51005 Tartu
loodus- ja täppisteaduste valdkond
Faculty phone: 
737 5820
Faculty address: 
Vanemuise 46–208, 51014 Tartu
  • valdkonna dekanaat
    Faculty phone: 
    737 5820
    Faculty address: 
    Vanemuise 46–208, 51003 Tartu
  • arvutiteaduse instituut
    Faculty phone: 
    737 5445
    Faculty address: 
    Narva mnt 18, 51009 Tartu
  • genoomika instituut
    Faculty phone: 
    737 4000
    Faculty address: 
    Riia 23b, 51010 Tartu
  • Eesti mereinstituut
    Faculty phone: 
    671 8902
    Faculty address: 
    Mäealuse 14, 12618 Tallinn
  • füüsika instituut
    Faculty address: 
    W. Ostwaldi 1, 50411 Tartu
  • keemia instituut
    Faculty phone: 
    737 5261
    Faculty address: 
    Ravila 14a, 50411 Tartu
  • matemaatika ja statistika instituut
    Faculty phone: 
    737 5860
    Faculty address: 
    Narva mnt 18, 51009 Tartu
  • molekulaar- ja rakubioloogia instituut
    Faculty phone: 
    737 5027
    Faculty address: 
    Riia 23, 23b–134, 51010 Tartu
  • Tartu observatoorium
    Faculty phone: 
    737 4510
    Faculty address: 
    Observatooriumi 1, Tõravere, 61602 Tartumaa
  • tehnoloogiainstituut
    Faculty phone: 
    737 4800
    Faculty address: 
    Nooruse 1, 50411 Tartu
  • ökoloogia ja maateaduste instituut
    Faculty phone: 
    737 5835
    Faculty address: 
    Vanemuise 46, 51003 Tartu
Asutused
  • raamatukogu
    Faculty phone: 
    737 5702
    Faculty address: 
    W. Struve 1, 50091 Tartu
  • teaduskool
    Faculty phone: 
    737 5581
    Faculty address: 
    Uppsala 10, 51003 Tartu
  • muuseum
    Faculty phone: 
    737 5674
    Faculty address: 
    Lossi 25, 51003 Tartu
  • loodusmuuseum ja botaanikaaed
    Faculty phone: 
    737 6076
    Faculty address: 
    Vanemuise 46, 51003 Tartu
Tugiüksused
  • ettevõtlus- ja innovatsioonikeskus
    Faculty phone: 
    737 4809
    Faculty address: 
    Narva mnt 18, 51009, Tartu
  • grandikeskus
    Faculty phone: 
    737 6215
    Faculty address: 
    Raekoja plats 9, 51004 Tartu
  • hankeosakond
    Faculty phone: 
    737 6632
    Faculty address: 
    Ülikooli 18a, 51005 Tartu
  • infotehnoloogia osakond
    Faculty phone: 
    737 6000, arvutiabi: 737 5500
    Faculty address: 
    Ülikooli 18a, 51005 Tartu
  • kantselei
    Faculty phone: 
    737 5606
    Faculty address: 
    Ülikooli 18a, 51005 Tartu
  • kinnisvaraosakond
    Faculty phone: 
    737 5137
    Faculty address: 
    Ülikooli 18a, 51005 Tartu
  • kirjastus
    Faculty phone: 
    +372 737 5945
    Faculty address: 
    W. Struve 1, 50091 Tartu
  • personaliosakond
    Faculty phone: 
    737 5145
    Faculty address: 
    Ülikooli 18, ruumid 302 ja 304, 50090 Tartu
  • rahandusosakond
    Faculty phone: 
    737 5125
    Faculty address: 
    Jakobi 4, 51005 Tartu
  • rahvusvahelise koostöö ja protokolli osakond
    Faculty phone: 
    737 6123
    Faculty address: 
    Ülikooli 18, ruumid 104, 304, 305, 50090 Tartu
  • rektoraadi büroo
    Faculty phone: 
    737 5600
    Faculty address: 
    Ülikooli 18, 51014 Tartu
  • siseauditi büroo
    Faculty address: 
    Ülikooli 18–244, 51005 Tartu
  • Tallinna esindus
    Faculty phone: 
    737 6600
    Faculty address: 
    Teatri väljak 3, 10143 Tallinn
  • turundus- ja kommunikatsiooniosakond
    Faculty phone: 
    737 5687
    Faculty address: 
    Ülikooli 18, ruumid 102, 104, 209, 210, 50090 Tartu
  • õppeosakond
    Faculty phone: 
    737 5620
    Faculty address: 
    Ülikooli 18, 50090 Tartu
  • üliõpilasesindus
    Faculty address: 
    Ülikooli 18b, 51005 Tartu
Muud üksused
  • MTÜ Tartu Ülikooli Akadeemiline Spordiklubi
    Faculty phone: 
    737 5371
    Faculty address: 
    Ujula 4, 51008 Tartu
  • MTÜ Tartu Üliõpilasküla
    Faculty phone: 
    740 9959
    Faculty address: 
    Narva mnt 25, 51013 Tartu
  • MTÜ Tartu Üliõpilasmaja
    Faculty phone: 
    730 2400
    Faculty address: 
    Kalevi 24, Tartu
  • SA Tartu Ülikooli Kliinikum
    Faculty phone: 
    731 8111
    Faculty address: 
    L. Puusepa 1a, 50406 Tartu
  • Tartu Ülikooli Sihtasutus
    Faculty phone: 
    737 5852
    Faculty address: 
    Ülikooli 18a–106, Tartu

TÜ üksuste kontaktandmed

humanitaarteaduste ja kunstide valdkond
Faculty phone: 
737 5341
Faculty address: 
Jakobi 2, ruumid 116–121, 51014 Tartu
  • valdkonna dekanaat
    Faculty phone: 
    737 5341
    Faculty address: 
    Jakobi 2, ruumid 116–121, 51005 Tartu
  • ajaloo ja arheoloogia instituut
    Faculty phone: 
    737 5651
    Faculty address: 
    Jakobi 2, 51005 Tartu
  • eesti ja üldkeeleteaduse instituut
    Faculty phone: 
    737 5221
    Faculty address: 
    Jakobi 2, IV korrus, 51005 Tartu
  • filosoofia ja semiootika instituut
    Faculty phone: 
    737 5314
    Faculty address: 
    Jakobi 2, ruumid 309–352, 51005 Tartu
  • kultuuriteaduste instituut
    Faculty phone: 
    737 5223
    Faculty address: 
    Ülikooli 16, 51003 Tartu
  • maailma keelte ja kultuuride kolledž
    Faculty address: 
    J. Liivi 4, 50409, Tartu
  • usuteaduskond
    Faculty phone: 
    737 5300
    Faculty address: 
    Ülikooli 18-310, 50090 Tartu
  • Viljandi kultuuriakadeemia
    Faculty phone: 
    435 5232
    Faculty address: 
    Posti 1, 71004 Viljandi
sotsiaalteaduste valdkond
Faculty phone: 
737 5957
Faculty address: 
Lossi 36, 51003 Tartu
  • valdkonna dekanaat
    Faculty phone: 
    737 5900
    Faculty address: 
    Lossi 36, 51003 Tartu
  • haridusteaduste instituut
    Faculty phone: 
    737 6440
    Faculty address: 
    Salme 1a–29, 50103 Tartu
  • Johan Skytte poliitikauuringute instituut
    Faculty phone: 
    737 5582
    Faculty address: 
    Lossi 36–301, 51003 Tartu
  • majandusteaduskond
    Faculty phone: 
    737 6310
    Faculty address: 
    Narva mnt 18, 51009 Tartu
  • psühholoogia instituut
    Faculty phone: 
    737 5902
    Faculty address: 
    Näituse 2, 50409 Tartu
  • õigusteaduskond
    Faculty phone: 
    737 5390
    Faculty address: 
    Näituse 20–324, 50409 Tartu
  • ühiskonnateaduste instituut
    Faculty phone: 
    737 5188
    Faculty address: 
    Lossi 36, 51003 Tartu
  • Narva kolledž
    Faculty phone: 
    740 1900
    Faculty address: 
    Raekoja plats 2, 20307 Narva
  • Pärnu kolledž
    Faculty phone: 
    445 0520
    Faculty address: 
    Ringi 35, 80012 Pärnu
meditsiiniteaduste valdkond
Faculty phone: 
737 5326
Faculty address: 
Ravila 19, 50411 Tartu
  • valdkonna dekanaat
    Faculty phone: 
    737 5326
    Faculty address: 
    Ravila 19, 50411 Tartu
  • bio- ja siirdemeditsiini instituut
    Faculty phone: 
    737 4210
    Faculty address: 
    Biomeedikum, Ravila 19, 50411 Tartu
  • farmaatsia instituut
    Faculty phone: 
    737 5286
    Faculty address: 
    Nooruse 1, 50411 Tartu
  • hambaarstiteaduse instituut
    Faculty phone: 
    731 9856
    Faculty address: 
    Raekoja plats 6, 51003 Tartu
  • kliinilise meditsiini instituut
    Faculty phone: 
    737 5323
    Faculty address: 
    L. Puusepa 8, 50406 Tartu
  • peremeditsiini ja rahvatervishoiu instituut
    Faculty phone: 
    737 4190
    Faculty address: 
    Ravila 19, 50411 Tartu
  • sporditeaduste ja füsioteraapia instituut
    Faculty phone: 
    737 5360
    Faculty address: 
    Jakobi 5–205, 51005 Tartu
loodus- ja täppisteaduste valdkond
Faculty phone: 
737 5820
Faculty address: 
Vanemuise 46–208, 51014 Tartu
  • valdkonna dekanaat
    Faculty phone: 
    737 5820
    Faculty address: 
    Vanemuise 46–208, 51003 Tartu
  • arvutiteaduse instituut
    Faculty phone: 
    737 5445
    Faculty address: 
    Narva mnt 18, 51009 Tartu
  • genoomika instituut
    Faculty phone: 
    737 4000
    Faculty address: 
    Riia 23b, 51010 Tartu
  • Eesti mereinstituut
    Faculty phone: 
    671 8902
    Faculty address: 
    Mäealuse 14, 12618 Tallinn
  • füüsika instituut
    Faculty address: 
    W. Ostwaldi 1, 50411 Tartu
  • keemia instituut
    Faculty phone: 
    737 5261
    Faculty address: 
    Ravila 14a, 50411 Tartu
  • matemaatika ja statistika instituut
    Faculty phone: 
    737 5860
    Faculty address: 
    Narva mnt 18, 51009 Tartu
  • molekulaar- ja rakubioloogia instituut
    Faculty phone: 
    737 5027
    Faculty address: 
    Riia 23, 23b–134, 51010 Tartu
  • Tartu observatoorium
    Faculty phone: 
    737 4510
    Faculty address: 
    Observatooriumi 1, Tõravere, 61602 Tartumaa
  • tehnoloogiainstituut
    Faculty phone: 
    737 4800
    Faculty address: 
    Nooruse 1, 50411 Tartu
  • ökoloogia ja maateaduste instituut
    Faculty phone: 
    737 5835
    Faculty address: 
    Vanemuise 46, 51003 Tartu
Asutused
  • raamatukogu
    Faculty phone: 
    737 5702
    Faculty address: 
    W. Struve 1, 50091 Tartu
  • teaduskool
    Faculty phone: 
    737 5581
    Faculty address: 
    Uppsala 10, 51003 Tartu
  • muuseum
    Faculty phone: 
    737 5674
    Faculty address: 
    Lossi 25, 51003 Tartu
  • loodusmuuseum ja botaanikaaed
    Faculty phone: 
    737 6076
    Faculty address: 
    Vanemuise 46, 51003 Tartu
Tugiüksused
  • ettevõtlus- ja innovatsioonikeskus
    Faculty phone: 
    737 4809
    Faculty address: 
    Narva mnt 18, 51009, Tartu
  • grandikeskus
    Faculty phone: 
    737 6215
    Faculty address: 
    Raekoja plats 9, 51004 Tartu
  • hankeosakond
    Faculty phone: 
    737 6632
    Faculty address: 
    Ülikooli 18a, 51005 Tartu
  • infotehnoloogia osakond
    Faculty phone: 
    737 6000, arvutiabi: 737 5500
    Faculty address: 
    Ülikooli 18a, 51005 Tartu
  • kantselei
    Faculty phone: 
    737 5606
    Faculty address: 
    Ülikooli 18a, 51005 Tartu
  • kinnisvaraosakond
    Faculty phone: 
    737 5137
    Faculty address: 
    Ülikooli 18a, 51005 Tartu
  • kirjastus
    Faculty phone: 
    +372 737 5945
    Faculty address: 
    W. Struve 1, 50091 Tartu
  • personaliosakond
    Faculty phone: 
    737 5145
    Faculty address: 
    Ülikooli 18, ruumid 302 ja 304, 50090 Tartu
  • rahandusosakond
    Faculty phone: 
    737 5125
    Faculty address: 
    Jakobi 4, 51005 Tartu
  • rahvusvahelise koostöö ja protokolli osakond
    Faculty phone: 
    737 6123
    Faculty address: 
    Ülikooli 18, ruumid 104, 304, 305, 50090 Tartu
  • rektoraadi büroo
    Faculty phone: 
    737 5600
    Faculty address: 
    Ülikooli 18, 51014 Tartu
  • siseauditi büroo
    Faculty address: 
    Ülikooli 18–244, 51005 Tartu
  • Tallinna esindus
    Faculty phone: 
    737 6600
    Faculty address: 
    Teatri väljak 3, 10143 Tallinn
  • turundus- ja kommunikatsiooniosakond
    Faculty phone: 
    737 5687
    Faculty address: 
    Ülikooli 18, ruumid 102, 104, 209, 210, 50090 Tartu
  • õppeosakond
    Faculty phone: 
    737 5620
    Faculty address: 
    Ülikooli 18, 50090 Tartu
  • üliõpilasesindus
    Faculty address: 
    Ülikooli 18b, 51005 Tartu
Muud üksused
  • MTÜ Tartu Ülikooli Akadeemiline Spordiklubi
    Faculty phone: 
    737 5371
    Faculty address: 
    Ujula 4, 51008 Tartu
  • MTÜ Tartu Üliõpilasküla
    Faculty phone: 
    740 9959
    Faculty address: 
    Narva mnt 25, 51013 Tartu
  • MTÜ Tartu Üliõpilasmaja
    Faculty phone: 
    730 2400
    Faculty address: 
    Kalevi 24, Tartu
  • SA Tartu Ülikooli Kliinikum
    Faculty phone: 
    731 8111
    Faculty address: 
    L. Puusepa 1a, 50406 Tartu
  • Tartu Ülikooli Sihtasutus
    Faculty phone: 
    737 5852
    Faculty address: 
    Ülikooli 18a–106, Tartu

Publikatsioonid ja patendid

Publikatsioonid

2021

  • Lieberg J, Wanhainen A, Ottas A, Vähi M, Zilmer M, Soomets U, Björck M, Kals J. Metabolomic Profile of Abdominal Aortic Aneurysm. Metabolites. 2021 Aug 22;11(8):555. doi: 10.3390/metabo11080555. PMID: 34436496; PMCID: PMC8401627.
  • Kaare M, Mikheim K, Lilleväli K, Kilk K, Jagomäe T, Leidmaa E, Piirsalu M, Porosk R, Singh K, Reimets R, Taalberg E, Schäfer MKE, Plaas M, Vasar E, Philips MA. High-fat diet induces pre-diabetes and distinct sex-specific metabolic alterations in Negr1-deficient mice. Biomedicines. 2021 Sep 3;9(9):1148. doi: 10.3390/biomedicines9091148.
  • Ilves L, Ottas A, Kaldvee B, Abram K, Soomets U, Zilmer M, Jaks V, Kingo K. Metabolomic Analysis of Skin Biopsies from Patients with Atopic Dermatitis Reveals Hallmarks of Inflammation, Disrupted Barrier Function and Oxidative Stress. Acta Derm Venereol. 2021 Feb 24;101(2):adv00407. doi: 10.2340/00015555-3766. PMID: 33585945.
  • Kiens O, Taalberg E, Ivanova V, Veeväli K, Laurits T, Tamm R, Ottas A, Kilk K, Soomets U, Altraja A. The effect of obstructive sleep apnea on peripheral blood amino acid and biogenic amide metabolome at multiple time points overnight. Sci Rep. 2021 May 24;11(1):10811. doi: 10.1038/s41598-021-88409-y.

2020

  • Kasepalu T, Kuusik K, Lepner U, Starkopf J, Zilmer M, Eha J, Vähi M, Kals J. Oxidative Medicine and Cellular Longevity. Clinical Study. Remote Ischaemic Preconditioning Reduces Kidney Injury Biomarkers in Patients Undergoing Open Surgical Lower Limb Revascularisation: A Ran-domised Trial. Oxid Med Cell Longev. 2020 Jan 23;2020:7098505. doi: 10.1155/2020/7098505. eCollection 2020.
  • Teeäär T, Serg M, Paapstel K, Vähi M, Kals J, Cockcroft J, Zilmer M, Eha J, Kampus P. Int J Hypertens. Atenolol's Inferior Ability to Reduce Central vs Peripheral Blood Pressure Can Be Explained by the Combination of Its Heart Rate-Dependent and Heart Rate-Independent Effects. 2020 Apr 26;2020:4259187. doi: 10.1155/2020/4259187. eCollection 2020.
  • Kuusik K, Kepler T, Zilmer M, Eha J, Vähi M, Kals J. Eur J Vasc Endovasc Surg. Effects of Remote Ischaemic Preconditioning on Arterial Stiffness in Patients Undergoing Lower Limb Angiographic Procedures: A Randomised Clinical Trial.2020 Dec;58(6):875-882. doi: 10.1016/j.ejvs.2019.06.004.
  • Tootsi K, Vilba K, Märtson A,Kals J, Paapstel K, Zilmer M.  Metabolites. Metabolomic Signature of Amino Acids, Biogenic Amines and Lipids in Blood Serum of Pa-tients with Severe Osteoarthritis.2020, 10, 323; doi:10.3390/metabo10080323.
  • Piirsalu, M, Taalberg, E, Lilleväli, K,Tian, L, Zilmer, M, Vasar, E. Front Pharmacol. Treatment With Lipopolysaccharide Induces Distinct Changes in Metabolite Profile and Body Weight in 129Sv and Bl6 Mouse Strains. 2020 Mar 27;11:371. doi: 10.3389/fphar.2020.00371. eCollection 2020
  • Parksepp, M, Leppik L, Koch K, Uppin K,  Kangro R, Haring L, Vasar E, Zilmer M. Metabolomics approach revealed robust changes in amino acid and biogenic amine signatures in patients with schizophrenia in the early course of the disease. Sci. Rep. 2020 Aug 19;10(1):13983. doi: 10.1038/s41598-020-71014-w.
  • Taalberg E, Kilk K. Mapping metabolite and ICD-10 associations. Metabolites. 2020 May 14;10(5):196. doi: 10.3390/metabo10050196.
    Cansby E, Caputo M, Gao L, Kulkarni NM, Nerstedt A, Ståhlman M, Borén J, Porosk R, Soomets U, Pedrelli M, Parini P, Marschall HU, Nyström J, Howell BW, Mahlapuu M. Depletion of protein kinase STK25 ameliorates renal lipotoxicity and protects against diabetic kidney disease. JCI Insight. 2020 Dec 17;5(24):e140483. doi: 10.1172/jci.insight.140483
  • Pohla L, Ottas A, Kaldvee B, Abram K, Soomets U, Zilmer M, Reemann P, Jaks V, Kingo K. Hyperproliferation is the main driver of metabolomic changes in psoriasis lesional skin. Sci Rep. 2020 Feb 20;10(1):3081. doi: 10.1038/s41598-020-59996-z. PMID: 32080291; PMCID: PMC7033101.
  • Kilk K. Metabolomics horizon scanning for 2020: three actionable challenges. OMICS. 2020 Jan;24(1):51-52. doi: 10.1089/omi.2019.0194. Epub 2019 Dec 13.

2019

  • Asser A, Kõks S, Soomets U, Terasmaa A, Sauk M, Eltermaa M, Piip P, Ubhayasekera K, Bergquist J, Taba P. Acute effects of methcathinone and manganese in mice: A dose response study. Heliyon. 2019 Sep 20;5(9):e02475. doi: 10.1016/j.heliyon.2019.e02475. PMID: 31687570; PMCID: PMC6819833.
  • Jürgenson J, Serg M,  Kampus P, Kals J, Muda P, Zagura M, Viru M, Zilmer M, Eha J, Unt E. Research Reports in Clinical Cardiology. The effect of pre-seasonal strength training on central hemody-namics and cardiac function in elite powerlifting athletes. 2019, 10 33–41.
    Kairane, C.; Mahlapuu, R.; Porosk, R.; Zilmer, M.; Soomets, U. (2019). The effects of glutathione analogues on Na,K-ATPase activity in the kidneys of the wildtype and the Wfs1 gene mutated mice in vitro and in vivo. Journal of Peptide Science, 223−225.10.17952/35EPS.2018.223.
  • Kilk K. Metabolomics for animal models of rare human diseases: An expert review and lessons learned. OMICS. 2019 Jun;23(6):300-307. doi: 10.1089/omi.2019.0065. Epub 2019 May 23.
  • Ainelo A, Porosk R, Kilk K, Rosendahl S, Remme J, Hõrak R. Toxins (Basel). Pseudomonas putida responds to the toxin GraT by inducing ribosome biogenesis factors and repressing TCA cycle enzymes. 2019 Feb 9;11(2):103. doi: 10.3390/toxins11020103.
  • Kepler T, Kuusik K, Lepner U, Starkopf J, Zilmer M, Eha J, Lieberg J, Vähi M, Kals J (2019) The Effect of Remote Ischaemic Preconditioning on Arterial Stiffness in Patients Undergoing Vascular Surgery: A Randomised Clinical Trial. Eur J Vasc Endovasc Surg. Jun;57(6):868-875. doi: 10.1016/j.ejvs.2018.12.002. Epub 2019 May 22.
  • Balõtšev, Roman; Haring, Liina; Koido, Kati; Leping, Vambola, Kriisa, Kärt; Zilmer, Mihkel; Vasar, Veiko; Piir, Anneli; Lang, Aavo; Vasar, Eero (2019). Antipsychotic treatment is associated with inflammatory and metabolic biomarkers alterations among first-episode psychosis patients: A 7-month follow-up study. Early Intervention in Psychiatry, 13, 1−9.10.1111/eip.12457 [ilmumas].
  • Nõmm, Monika; Porosk, Rando; Pärn, Pille; Kilk, Kalle; Soomets, Ursel; Kõks, Sulev; Jaakma, Ülle (2019). Invitro culture and non-invasive metabolic profiling of single bovine embryos. Reproduction Fertility and Development, 31 (2), 306−314.10.1071/RD17446.
  • Jürgenson J, Serg M, Kampus P, Kals J, Zagura M, Viru M, Zilmer K, Zilmer M, Eha J, Unt E. (2019). Oxidative Stress Parameters and Its Associations With Arterial Stiffness in Competitive Powerlifting Athletes After 12-Week Supervised Strength Training. J Strength Cond Res. 2019 Jul;33(7):1816-1822. doi: 10.1519/JSC.0000000000003067.
  • Leppik L, Parksepp M, Janno S, Koido K, Haring L, Vasar E, Zilmer M.  (2019) Profiling of lipidomics before and after antipsychotic treatment in first-episode psychosis. Eur Arch Psychiatry Clin Neurosci. 2019 Jan 2. doi: 10.1007/s00406-018-0971-6. [Epub ahead of print].

2018

  • Vanaveski T, Narvik J, Innos J, Philips MA, Ottas A, Plaas M, Haring L, Zilmer M, Vasar E. (2018) Repeated Administration of D-Amphetamine Induces Distinct Alterations in Behavior and Metabolite Levels in 129Sv and Bl6 Mouse Strains. Front Neurosci. 2018 Jun 12; 12:399. doi: 10.3389/fnins.2018.00399. eCollection 2018
  • Paapstel, Kaido; Kals, Jaak; Eha, Jaan; Tootsi, Kaspar; Ottas, Aigar; Piir, Anneli; Jakobson, Meelis; Lieberg, Jüri; Zilmer, Mihkel (2018). Inverse relations of serum phosphatidylcholines and lysophosphatidylcholines with vascular damage and heart rate in patients with atherosclerosis. Nutrition, Metabolism and Cardiovascular Diseases, 28 (1), 44−52.10.1016/ j.numecd. 2017.07.011.
  • Tootsi, Kaspar; Kals, Jaak; Zilmer, Mihkel; Paapstel, Kaido; Märtson, Aare (2018). Medium- and long-chain acylcarnitines are associated with osteoarthritis severity and arterial stiffness in end-stage osteoarthritis patients: a case-control study. International Journal of Rheumatic Diseases, 21 (6), 1211−1218.10.1111/1756-185X.13251.
  • Eskla KL, Porosk R, Reimets R, Visnapuu T, Vasar E, Hundahl CA, Luuk H. Hypothermia augments stress response in mammalian cells. Free Radic Biol Med. 2018 Jun;121:157-168. doi: 10.1016/j.freeradbiomed.2018.04.571. Epub 2018 Apr 25. PMID: 29704622.
  • Kilk K, Aug A, Ottas A, Soomets U, Altraja S, Altraja A. Phenotyping of Chronic Obstructive Pulmonary Disease Based on the Integration of Metabolomes and Clinical Characteristics. Int J Mol Sci. 2018 Feb 27;19(3):666. doi: 10.3390/ijms19030666. PMID: 29495451; PMCID: PMC5877527.
  • Leppik, Liisa; Kriisa, Kärt; Koido, Kati; Koch, Kadri; Kajalaid Kärolin; Haring, Liina; Vasar, Eero; Zilmer, Mihkel (2018). Profiling of Amino Acids and Their Derivatives Biogenic Amines Before and After Antipsychotic Treatment in First-Episode Psychosis. Frontiers in Psychiatry, 9, 155.10.3389/fpsyt.2018.00155.
  • Teeäär, Tuuli; Serg, Martin; Paapstel, Kaido; Kals, Jaak; Kals, Mart; Zilmer, Mihkel; Eha, Jaan; Kampus, Priit (2018). Heart rate reduction decreases central blood pressure in sick sinus syndrome patients with a permanent cardiac pacemaker. Journal of Human Hypertension, 32 (5), 377−384.

2017

  • Ottas, Aigar; Fishman, Dmytro; Okas, Tiia-Linda; Kingo, Külli; Soomets, Ursel; (2017). The metabolic analysis of psoriasis identifies the associated metabolites while providing computational models for the monitoring of the disease. Archives of Dermatological Research, 309 (7), 519−528.10.1007/s00403-017-1760-1.
  • Porosk, R.; Mahlapuu, R.; Terasmaa, A.; Kilk, K.; Soomets, U. (2017). Glutathione system in Wolfram syndrome 1 deficient mice. Molecular Medicine Reports, 7092−7097.10.3892/ mmr.2017.7419.
  • Porosk, R.; Terasmaa, A.; Mahlapuu, R.; Soomets, U.; Kilk, K. (2017). Metabolomics of the Wolfram Syndrome 1 Gene (Wfs1) Deficient Mice. OMICS A Journal of Integrative Biology, 21 (2), 721−732.omi.2017.0143.
  • Ottas, Aigar; Fishman, Dmytro; Okas, Tiia-Linda; Püssa, Tõnu; Toomik, Peeter; Märtson, Aare, Kingo, Külli; Soomets, Ursel (2017). Blood serum metabolome of atopic dermatitis: Altered energy cycle and the markers of systemic inflammation. PLoS ONE, 12 (11), 1−14.10. 1371/ journal. pone. 0188580.
  • Kriisa, Kärt; Leppik, Liisa; Balõtšev, Roman; Ottas, Aigar; Soomets, Ursel; Koido, Kati; Volke, Vallo; Innos, Jürgen; Haring, Liina; Vasar, Eero; Zilmer, Mihkel (2017). Profiling of Acylcarnitines in First Episode Psychosis before and after Antipsychotic Treatment. Journal of Proteome Research, 16 (10), 3558−3566.10.1021/acs.jproteome.7b00279.
  • Kaspar Tootsi , Aare Märtson, Jaak Kals, Kaido Paapstel, Mihkel Zilmer (2017). Metabolic factors and oxidative stress in osteoarthritis: a case–control study. The Scandinavian Journal of Clinical and Laboratory Investigation, 77 (7), 520−526.10.1080/00365513.2017.1354255.

2016

  • Paapstel, Kaido; Zilmer, Mihkel; Eha, Jaan; Piir, Anneli; Tootsi, Kaspar; Kals, Jaak. (2016). Association between fibulin-1 and aortic augmentation index in male patients with peripheral arterial disease. European Journal of Vascular and Endovascular Surgery, 51, 76−82.
  • Tootsi, Kaspar; Kals, Jaak; Zilmer, Mihkel; Paapstel, Kaido; Märtson, Aare (2016). Severity of Osteoarthritis Is Associated with Increased Arterial Stiffness. International Journal of Rheumatology, 1−7.10.1155/2016/6402963.
  • Paapstel, Kaido; Zilmer, Mihkel; Eha, Jaan; Tootsi, Kaspar; Piir, Anneli; Kals, Jaak (2016). Early biomarkers of renal damage in relation to arterial stiffness and inflammation in male coronary artery disease patients. Kidney & Blood Pressure Research, 41, 488−497.10.1159/000443450.
  • Paapstel, Kaido; Kals, Jaak; Eha, Jaan; Tootsi, Kaspar; Ottas, Aigar; Piir, Anneli; Zilmer, Mihkel (2016). Metabolomic profiles of lipid metabolism, arterial stiffness and hemodynamics in male coronary artery disease patients. IJC Metabolic & Endocrine, 11, 13−18.10.1016/j.ijcme. 2016.05.001.
  • Koido, Kati; Innos, Jürgen; Haring, Liina; Zilmer, Mihkel; Ottas, Aigar; Vasar, Eero (2016). Taurine and Epidermal Growth Factor Belong to the Signature of First-Episode Psychosis. Frontiers in Neuroscience, 10, 331−331.10.3389/fnins.2016.00331.
  • Kaldur, Triin; Unt, Eve; Ööpik, Vahur; Zilmer, Mihkel; Eha, Jaan; Paapstel, Kaido; Kals, Jaak (2016). The acute effects of passive heat exposure on arterial stiffness, oxidative stress and inflammation. Medicina (Kaunas), 52, 211−216.
  • Kullisaar, Tiiu; Zilmer, Kersti; Salum, Tiit; Rehema, Aune; Zilmer, Mihkel. (2016). The use of probiotic L. fermentum ME-3 containing Reg'Activ Cholesterol supplement for 4 weeks has a positive influence on blood lipoprotein profiles and inflammatory cytokines: an open-label preliminary study. Nutrition Journal, 93 (15, 1), 93−93.10.1186/s12937-016-0213-6.
  • Tootsi, Kaspar; Kals, Jaak; Zilmer, Mihkel; Paapstel, Kaido; Märtson, Aare. (2016). Severity of osteoarthritis is associated with increased arterial stiffness. International Journal of Rheumatology, 1−7.10.1155/2016/6402963.
  • Asser, Andres; Kõks, Sulev; Snellman, Anniina; Haaparanta-Solin, Merja; Arponen, Eveliina; Grönroos, Tove; Nairismägi, Jaak; Bergquist, Jonas; Soomets, Ursel; Piip, Piret; Eltermaa, Mall; Sauk, Martin; Lindmäe, Hanna; Rinne, Juha O; Taba, Pille (2016). Increased striatal VMAT2 binding in mice after chronic administration of methcathinone and manganese. Brain Research, 1652, 97−102.10.1016/j.brainres.2016.09.034.

Patendid

  • Estonian Patent nr 05721 (19.08.2014). Isoleeritud mikroorganismide tüved Lactobacillus plantarum MCC1 DSM 23881 ja selle kasutamine. T.Kullisaar , M. Zilmer, E. Tammsaar, A. Veski¬oja, E. Songisepp, K. Zilmer, L. Bobrovski, K. Ehrlich, M. Rät¬sep, M. Punab, M. Vasar, M. Mikelsaar.
  • Patent of Russian Federation no 2486234. Isolated microorganism strain Lactobacillus plantarum INDUCIA DSM 21379 as a probiotic enhancing natural immunity, product and composition comprising said microorganism and use of said microorganism for medicinal preparation enhancing cellular immunity. M. Mikelsaar, E. Songisepp, I. Scmidt, J. Shepetova, P. Hütt, M. Zilmer, K. Truusalu, K. Kilk.
  • Patent of Russian Federation no 2477750. Isolated microorganism strain Lactobacillus plantarum TENSIA DSM 21380 as antimicrobial and antihypertensive probiotic, food poducts and composition comprising said microorganism and use of said microorganism for preparation of antihypertensive medicine and method for suppressing pathogens and non-starter lactobacilli in food product. E. Songisepp, M. Mikelsaar, M. Rätsep, M. Zilmer, P. Hütt, M. Utt, M. K. Zilmer, J. Üksti, S. Kõljalg.
  • Estonian patent EE 04580 (15.02.2006). Mikroorganismi tüvi Lactobacillus fermentum  ME-3 kui antimikroobne ja antioksüdantne probiootikum, Microorganism strain L. Fermentum  ME-3 as a novel antimicrobial and antioxidative probiotic. M. Mikelsaar, M. Zilmer, T. Kullisaar, H. Annuk, E.Songisepp.
  • Patent of Russian Federation No RU 2284354 (26.09,2006). Probiotik, M. Mikelsaar, M. Zilmer, T. Kullissaar, H. Annuk, E.Songisepp.
  • U.S. Patent No. 7244424 (17.07.2007). Strain of microrganism Lactobacillus fermentum ME-3 as a novel antimicrobial and antioxidative probiotic. M. Mikelsaar, M. Zilmer, T. Kullisaar, H. Annuk, E. Songisepp.
  • Estonian Patent No 05340 (13.05.2008). Isoleeritud mikroorganismi tüvi Lactobacillus plantarum Tensia DSM 21380 ja selle kasutamine antimikroobse ja vererõhku alandava probiootikumina ning ravimi valmistamiseks ning toiduaine realiseerimisaja pikendamiseks ja toiduaines kontamineerivate mikroorganismide allasurumiseks, tüve sisaldav toiduaine ja kompositsioon. E.Songisepp, M. Mikelsaar, M. Rätsep, M. Zilmer, P. Hütt, M. Utt, K. Zilmer, J. Üksti, S. Kõljalg.
  • Estonian Patent No 05341 (13.05.2008). Isoleeritud mikroorganismi tüvi Lactobacillus plantarum INDUCIA DSM 21379 kui organism loomulikku kaitsevõimat tõstev probiootik, seda sisaldav toiduaine ja kompositsioon ning mikroorganismi kasutamine rakulist immuunsust tõstva ravimi valmistamiseks. M. Mikelsaar, E. Songisepp, I. Smidt, J. Stsepetova, P. Hütt, M. Zilmer, K. Truusalu, K.Kilk.
  • European Patent EP1401457B1 (01.12.2010). Strain of micro-organism Lactobacillus fermentum ME-3 as novel antioxidative probiotic., M. Mikelsaar, M. Zilmer, T. Kullissaar, H. Annuk, E. Songisepp.
  • European patent No 2288360 B1 (12.05.2009). Isolated microorganism strain Lactobacillus plantarum INDUCIA DSM 21379 as  a probiotic that enhances natural immunity and food products and medicinal preparations comprising it. M. Mikelsaar, E. Songisepp, J. Stsepetova, P. Hütt, M. Zilmer, K. Truusalu, K. Kilk.
  • Patent: Cell penetrating peptides; CEPEP AB. Priit Kogerman, Mattias Hällbrink, Margus Pooga, Madis Metsis, Andres Valkna, Anne Meikas, Maria Lindgren, Astrid Gräslund, Claes Göran Östensson, Metka Budihna, Matjaz Zorko, Anna Elmquist, Ursel Soomets, Pontus Lundberg, Peter Järver, Külliki Saar, Samir El-Andaloussi, Kalle Kilk, Ülo Langel; SE20020001863; US20020391788P; 18.06.2002.